rs47217284 SNP Detail

Summary

• ID
  rs47217284
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72535298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TACAGCTGAC CAGACCAACG CCCAGGCTGC AGCCCTGTAT
  AAGGTAGGCA CTACAGGCCT GCTGGGGATT GGCCTGGTGT GAGATCCTGC ACAGAGCATC
  W
  GCAGGTGGCC AGGGTACAGA GCTGAAGGGA AGAGGCTGTG GGAAGGCTGG GCCAGGGCTC
  AGGTAGGTTT GTGGGGACTG GAGGAGAGAT GGTGGGAAGG A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133285613	ENSMUSSNP2459716	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47217284					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72535298 () rs orientation: forward

Symbol	Name	Function Class
Capg	capping actin protein, gelsolin like	within coordinates
Tssr57147	transcription start site region 57147	972 bp downstream
Tssr57148	transcription start site region 57148	358 bp upstream
Tssr57149	transcription start site region 57149	451 bp upstream
Tssr61469	transcription start site region 61469	500 bp upstream