rs47219468 SNP Detail

Summary

• ID
  rs47219468
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40507195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTATCTACA TTTTCCCTAC
  ATCCTCCCAC AGGGGATCTA TTTGGGAGAC AGCCTCAGCG GCCTGCCGTT TACTACTCAA
  AGAGGCTAAT AAGAATTCAT TTGGTGCTGT CTTCAGGTGA AGGCACAGAG GCTAAAGGAC
  CGCGGCCATT TCTTCCTGTT ATGCAATCAT CTGTGGCAGC CAGACATGAC CTCTGTGTCT
  R
  CTCCCTAGAG TCCCGGGAGC AGAAGTCACA GCTCGGCTGC TTCCCAGGAC TAGCTTACCT
  CCTCAGCAGT CCCTAGAATG TGCCCATAGG GAAAAAGTTA GGCAAGGGCA CTATGACTAG
  AATTCTACCC CCGAATGCCA TGTGATTAGT GCTGGTGAGC ACGGCAGGCA AACCTAGGCT
  GATTCTGTTT TGGTAGCAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147067415	ENSMUSSNP915307	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47219468					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40507195 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	within coordinates
Rr214674	regulatory region 214674	1595 bp distal
Rr224698	regulatory region 224698	within coordinates
Tssr93026	transcription start site region 93026	1146 bp downstream
Tssr93027	transcription start site region 93027	1136 bp downstream