rs47220460 SNP Detail

Summary

• ID
  rs47220460
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102549749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGCTGAC CAAGGCACAT
  ATTTGTGATG ATTCTCAATA CCTCCGAGGT CGAAATCTCT TCATTCCTAC TGATTGGGAT
  CCCAGGCTTT GAGCATATGC ACATTTGGAT TTCCATCCCT ATCTGCCTCA TGTACCTGAC
  AGCTATCCTG GGAAACTGCA CCATCCTCTG TGTCATCAGA ACAGAGCCTT CTCTGCATGA
  R
  CCCATGTACT ATTTTCTCTC CATGTTGGCC TTCTCTGATC TAGGTCTGTC TTTCTCCTCC
  ATCCCCACTA TGCTAAGAAT ATTCTTGTTC AATGCCATGG GGATTTCCAC TGATGCCTGC
  ATTGCCCAGG AATTCTTCAT CCATGGATTC ACAGACATGG AATCTTCAGT GCTCCTCATT
  ATGTCCTTTG ATCGCTTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss61042884	NES16081763	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs47220460					SNP	G	G	G	G	G	G	G	G	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61042884	NES16081763	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102549749 () rs orientation: forward

Symbol	Name	Function Class
Or51a8	olfactory receptor family 51 subfamily A member 8	within coordinates