rs47222206 SNP Detail

Summary

• ID
  rs47222206
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125221901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATATACAATA GAGTATGCAA TTATTTCCTT TCCCCTGGCC
  TTAAAAAGGC AAATTGAGAG TGAAGCACCT CTGTGTTTTA CTTAGCTTGT GTTATTTGGC
  W
  TAAAATGCAT CCTGGTGGTC CAAGACTTCA TGTTCAGACT GTATTAAAAA CAGCAGTTAT
  ATTTAAGAAT GTGAACTCAG ATTGGTTCAT TTGTTTCACG C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147476266	ENSMUSSNP7061963	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47222206					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125221901 () rs orientation: forward

Symbol	Name	Function Class
Fbn1	fibrillin 1	Intron
Rr564209	regulatory region 564209	563 bp distal