rs47223753 SNP Detail

Summary

• ID
  rs47223753
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:99551675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAT TTATCAAAGT GAAATATGTC
  Y
  GTAGGAGCAT ATAGATGTAT TATAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss137990980	ENSMUSSNP1157048	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss324135509	CHEV_12_100823626	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47223753					SNP	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:99551675 () rs orientation: forward

Symbol	Name	Function Class
Gm26839	predicted gene, 26839	within coordinates
Gm53755	predicted gene, 53755	within coordinates
Rr269924	regulatory region 269924	1850 bp proximal