rs47226924 SNP Detail

Summary

• ID
  rs47226924
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:29191743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACTGCTG GCTTGCTGTC
  TATCATTTCA AGGCAGAGGG GGATCTTTGG AGACCGGGCT CCACAGAGCT GAGTACAAGA
  AAGCAAAGGG ACGGGGCAAG TAAATAATTG AGTCCCGCGT TTCCCTGAGC CACAGCCACG
  GGAATCCCAC TTCCACACTG AGATGTGCGT GGAGCTAGGA GCTGTGGTAC TGTCCGTGTG
  Y
  CTAGGAGGTG AAAGAAGCAA AGAGGGCAGA ATGAGGCATG GCACTTTGTG AAGAATGGTG
  TCCTGGAGAC ACTGGGGTTT CTGCCTCTGT GTGAGCATCT GGCAGGGATA GAATACTCAG
  CCAGGTTGGG GTGGGGGGAG GCACTTCGCT CATCCCATGT GCCGTGAAGG CAGCCGAAGC
  TGGTAAATTC TGGGCTTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61587163	NES17538031	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47226924					SNP	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61587163	NES17538031	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:29191743 () rs orientation: forward

Symbol	Name	Function Class
Gm31333	predicted gene, 31333	185 bp upstream