rs47228317 SNP Detail

Summary

• ID
  rs47228317
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95616230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAC AGCCAGGGCT ACACAGAGAA
  M
  CCCTGTCTCA AAAAACAAAA AACAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135512727	ENSMUSSNP3895750	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320841199	CHEV_3_95512842	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47228317					SNP	A	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95616230 () rs orientation: forward

Symbol	Name	Function Class
D3Umi14	DNA segment, Chr 3, University of Michigan 14	931 bp distal
Rr367486	regulatory region 367486	1220 bp downstream
Tssr34521	transcription start site region 34521	1777 bp downstream