rs47228378 SNP Detail

Summary

• ID
  rs47228378
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:93130433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTACTGG CAGACAACCA
  CCTGGGTTTC CTGAAGGTCA CACAGGCTAC TCTTCCAAAA ATAATGAGCA TATGGTTCAA
  GCTTACTGAA GGTTCTATGT TCAGTATTGT GAGAAATCTG AATTCCTTAG AGCATTGGAC
  AGCCATGGAA ACCCCTTTTA CACATTGTAA ATGAATGGGA AGTCAAGCCC CTCGTCTGAG
  K
  GGTGAGCATC ATTCAATAGC AGTGCACTTT TGAGTGAGTA TTGTTTGGAA GTGTTGATTT
  CCCAGTGTCA GTAATTGGCA ATTTTTATGG AGTCTCATTA ATTTTTTTGT CATAGATATG
  CTGAGATCTT CTCATGGTTA CTTAAACTAC TCACTACCAT ACCATTTTAG ACATTGTTTT
  ACCTTTGCAA AGTCTATTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss137969107	ENSMUSSNP6918319	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs47228378					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:93130433 () rs orientation: forward

Symbol	Name	Function Class
Gm59657	predicted gene, 59657	within coordinates
Rr387632	regulatory region 387632	401 bp downstream