rs47230448 SNP Detail

Summary

• ID
  rs47230448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33876181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCACCATTT GGTTCTTAGG AGAAGGTCCC CTCGAGACCC
  TGGAATAACT GGACCTGCTG GACTGGTCAA GTGGCACCAG ATATGGGGCA CGAGGTACGA
  Y
  CACCCTCCGG ACATCGGATT CAAGAGGTAC AGCACAGACA GTGAGACAGT TCCCCGCCAC
  TTTGCTTGAG TGTCGTGGAC GTCGAGAGGT AAGCCTAGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148780165	ENSMUSSNP6526283	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss322148809	CHEV_7_34961775	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47230448					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33876181 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	712 bp downstream
Gm12783	predicted gene 12783	2 bp upstream
Rr380644	regulatory region 380644	167 bp downstream