rs47237454 SNP Detail

Summary

• ID
  rs47237454
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTCTGCT TGTACCTGTC
  TGCTCAGGGC TGCTCTCCAC CTCAACATCA CATGTCTCCT CCCTCTCACC ATGTCTCAGT
  TCACATATAG GTCAACCTAA GTTATGTTCT CCCAGCTGAG CTGCTGACTC CTGGCATCTG
  ACCTGGGGAC TTGGTCATTG GGCTGTACTC CTTTTTGCTG CTCCAGAGAG TAGTGGCTCT
  M
  TCCAGACCCT GAGCTGCTTC AGAGCAGCAT TTGAATTTTG CCTGACTGTG TAGCTGGTAG
  GCAGAGGCAT CCTGGACCTC CCAGTTTTGT GCCATGAAAG GCTACATGCA GGTCTCAGAC
  CCCATGAGAG AAGTTTCTTT GTGCAGTGAG CAGAACTTGT CTCTAAGTGA AACTATACCA
  CGCCCACATG GGCCCCACAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ
ss62679305	NES17312525	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ
rs47237454					SNP	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62679305	NES17312525	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903449 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	1156 bp upstream
Rr339615	regulatory region 339615	1151 bp proximal
Tssr143733	transcription start site region 143733	1110 bp upstream
Tssr143734	transcription start site region 143734	1135 bp upstream
Tssr143735	transcription start site region 143735	1164 bp upstream
Tssr143736	transcription start site region 143736	1180 bp upstream
Tssr143737	transcription start site region 143737	1618 bp upstream