AGCTCTAGCT GTCTTGGAAC TCACTCTGTA GACCAGGCTG TCCTCTAACA CAGAGATCTT CCTGCTCTGG AATTAAAGGA GTGTGCCACC ATCACCCAAC TTCAAATACC TTTTCAGTGA AGAAAAAGGC ATCAGACTTT ATGGGTTACT TGAGTTTACC CAGCTTAGAA AAAGTAAGTA CTTAGCCACA AAGACCTATG Y AGTCATTCTT CATTTGTACA TGGGGCCTTT CTGGTTCTCT GGTGGAGTTG GTTATTTTGT GTTTAACTGG TTTTTAGTGA CCAAAGGCAT TCTATAAGGC CTTAAGAATA AGGTTTTTGA CATACCAAGA TATATATATA TATATTTAAA ATTTTTTTAG GTCAACAGTC TCAGAGATGT TTCTCTTAAT TTATCTACTT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
BTBR T<+> Itpr3 |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss52444344 | NES15422750 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | C | T | C | T | C | C |
SNP Consensus Information | ||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
BTBR T<+> Itpr3 |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
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rs47239554 | SNP | T | T | T | C | T | C | T | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss52444344 | NES15422750 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr12:71368823 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930474H06Rik | RIKEN cDNA 4930474H06 gene | 363 bp upstream | ||||||
Dact1 | dishevelled-binding antagonist of beta-catenin 1 | 1942 bp downstream | ||||||
Rr267972 | regulatory region 267972 | 378 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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