rs47240026 SNP Detail

Summary

• ID
  rs47240026
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:108623732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTC CCCTGCAGTG GGGATGTTGG
  C
  TGTTGGTATG GCTTCCTCTG GGTGT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss138677502	ENSMUSSNP5976907	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47240026					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:108623732 () rs orientation: forward

Symbol	Name	Function Class
Evl	Ena-vasodilator stimulated phosphoprotein	within coordinates
Mir342	microRNA 342	1147 bp upstream
Rr472585	regulatory region 472585	within coordinates
Rr472586	regulatory region 472586	90 bp proximal
Tssr114995	transcription start site region 114995	1206 bp upstream