rs47241023 SNP Detail

Summary

• ID
  rs47241023
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145286352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TCCCTCTTCC TGCTTTCAAC CTGTCTATCT GAACCATGCT
  CTGCCTCACC CCATTTCACA ACTAATTTTT GTTTATTGCA AGATTACACT TCTGTATGTC
  C
  AGATGTCCTG ACACAAAAAT GTCCACTTTC TGCCCCAGGT TCTCGTGAGC TGGCTTGGTA
  TATTGACCAG ACAGTTTTGG CAAATCTTTT CAAACAGGCC A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147865726	ENSMUSSNP7227670	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47241023					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145286352 () rs orientation: forward

Symbol	Name	Function Class
Gm21978	predicted gene 21978	847 bp upstream
Rr398684	regulatory region 398684	1532 bp downstream