rs47247898 SNP Detail

Summary

• ID
  rs47247898
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30215292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGGGGCGT CTGCATCGCC TAGCTATGGC CAGAGGCCCA
  TGCTGGGGCC TAGCCAGGCT TCTGCGCAGA GGTGAGCTTC CACTGCCGGT GTGGTGTGGG
  K
  AAAGAACCAA CCACGGAGGG ACAACTTCAA TTGAGCCGGT CCAGAACTGG GTGCCAGGGT
  CCTTATGCTG TTGCTTGCCA AGATCTACGG TCAGAGATG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148681276	ENSMUSSNP4339640	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss322134969	CHEV_7_31300886	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47247898					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30215292 () rs orientation: forward

Symbol	Name	Function Class
Arhgap33os	Rho GTPase activating protein 33, opposite strand	within coordinates
Tssr2186	transcription start site region 2186	631 bp downstream
Tssr65778	transcription start site region 65778	711 bp downstream