rs47248449 SNP Detail

Summary

• ID
  rs47248449
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61696426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAATGCA ATTTTACATG
  GTTCCACTTG ACAAAAGGCA AAAACAGCCA GTGGTGTGTG GGGGCTCTGA GCATGTATCT
  GGTTGCTTGG GAATAGATGC TCTTGTAAAA GGAAGTGTCT TTGTCTGTCT GGACCCTTCT
  GATTATGATT TTGAGCTGCC AGATGCAGCT GCTGCTGATG CTTTCTACCC AGCTGCGCCA
  Y
  TGTTTACAAG CGCAGTGATT ATAAGAATGA GCCATCACAC TAGATTAGAA CTTTATGTCT
  ATTAGAATGA TTAGACTACA GAAAAAGCAG ATTAGATTTA AAAAAGAAAT ATATCTAATG
  AACATGAAAT GGCTTAAAGT ATAGTCATTG TAAAGAAATA ATTTAACAGG TAGTATGAAA
  ATTTATTTTA AGACAGGTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144765193	ENSMUSSNP7194376	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47248449					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61696426 () rs orientation: forward

Symbol	Name	Function Class
Gm72932	predicted gene, 72932	within coordinates
Mir344f	microRNA Mir344f	430 bp upstream
Rr647584	regulatory region 647584	within coordinates
Tssr72743	transcription start site region 72743	428 bp upstream