rs47248969 SNP Detail

Summary

• ID
  rs47248969
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:107456401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGAACTAA GCCTATGTGT TTCTCACAGA ACACTTTAAA
  GGATACCTTA ACAGATCAGC AACAAATCAT GCATTGATAA TGTTTTCCAT TTTATGTCCC
  R
  TTATTATTCC ATTTGAAACT GTTCTTTTTT TTTTTTTCTT AGAAACATAC CAGTGGAAAC
  CATAATAATT GCTGTTACTT GGCAACCTAC AGAAGGGAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145102840	ENSMUSSNP1600084	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47248969					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:107456401 () rs orientation: forward

Symbol	Name	Function Class
Gm70772	predicted gene, 70772	1859 bp upstream
Rr416649	regulatory region 416649	790 bp proximal
Serpinb10	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10	356 bp upstream
Tssr8339	transcription start site region 8339	332 bp upstream
Tssr8340	transcription start site region 8340	347 bp upstream