rs47251683 SNP Detail

Summary

• ID
  rs47251683
• Variation Type
  SNP
• Alleles
  A/C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32305839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCT TCATGCCCCC CGGGGGGGGG
  V
  GGGGGGGGCA GGGCTTCAAC TCCAA                                      
  
  V = A/C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133098896	ENSMUSSNP5522018	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321777587	CHEV_6_32278904	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47251683					SNP	A	A	A	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32305839 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628093	regulatory region 628093	1370 bp distal
Rr628094	regulatory region 628094	321 bp distal
Rr628095	regulatory region 628095	603 bp distal