rs47259767 SNP Detail

Summary

• ID
  rs47259767
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171575484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACA TTGGGCATCC CCTGCCAATC
  R
  GAAGAATCTC CTGAATTCTC TTAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss120005008	PARCsnp_1.04772	PARC_SEQ	INBRED	f	SNP		A	G
ss146173600	ENSMUSSNP539046	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G		A
ss320120640	CHEV_1_173678047	CHEVERUD	SCREENING_POP	f	SNP				G		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs47259767					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171575484 () rs orientation: forward

Symbol	Name	Function Class
Rr423388	regulatory region 423388	380 bp proximal