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rs47260383 SNP Detail
Summary
  • ID
    rs47260383
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr9:50670704 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ACCTAGTGAA GCAAACACTT
    TATTGAATAA TTGACTGAAT TTTTAAGACA GAATTATTAA GATTCTATTT GCATATGACT
    TAATTTACTC AAGTTGTGCA GTGTGCTCTC AATAATACAT TCATAGACCT ACACATCTAT
    CCCTACAGTC AATTTTAGAT TTTACTATTC AATATGTTAT AGCCTTCAGC TCTCAGCAAC
    Y
    ATGTGACTAC TGTATTTGCT GATTTGCCTA TTTTGGATAC TTCCTAATAA TCTTTAATAT
    GTGGCCCTTG GTGACTAGCT TTAAAGGTTT TCTTTTGTTG TTGTTTGTTT GTTTTTGAGA
    TTGTAAATAT GTTTGTTGTG GTGGTTTCCT AGGCATGGAG GGTTTCTCAC TGTATATAGC
    CTTGGCTGCC TTGGAAGTTA                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
DBA/2J
ss136480993 ENSMUSSNP6674339 ENSEMBL ENSEMBL_Sanger f SNP T C
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
DBA/2J
rs47260383 SNP T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr9:50670704 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cfap68 cilia and flagella associated protein 68 1970 bp downstream
Gm67659 predicted gene, 67659 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory