rs47261771 SNP Detail

Summary

• ID
  rs47261771
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148418104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAACAAAA GGACCCCAGG
  ACTGGAGCTG ACTCCCCAGA CCTCACTGCC CAACAGAGTG AAGAGAAGGG ACTCCAGTGG
  GGCCTGGCTG TGGATTTGTA GAGAAGGAAG AATGCTACTC ATACCGAAAT GGCTGTGACT
  GCCTTTACCT CACTAACTGA TTTGCAAGTA AGTTTTCATT TTGTCCCCAT GAGAACTACT
  R
  GAAAAGGTGG GCACCAATGT GTCCATTCTG CAGATGAGGG AACTGAGGCT GGCTTTAAGT
  CATAGAGCTA GCAGGGACAG AGCTGAAGGT GGAAGCAGTG CCCTCTGGAG CCAAGCCTGA
  AACTTGCTCT GAAAGGCAGA GACGACAGAA AGAGCTTGGC CGCCATCAGA CAGACAGACC
  GAAGAGCTGG GGTCTGAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148002211	ENSMUSSNP7074021	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47261771					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148418104 () rs orientation: forward

Symbol	Name	Function Class
Gm68587	predicted gene, 68587	within coordinates
Tssr40269	transcription start site region 40269	1336 bp downstream
Tssr40270	transcription start site region 40270	162 bp downstream