rs47263497 SNP Detail

Summary

• ID
  rs47263497
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:41376444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GTCTATACAG GGATTTCTCT TGGATGACAT GACTGAGGCA
  GTGTGGCTGC TGCACACATT AAATGCTCCT CCACACTCTT CCTGGGGCAG ATTTCTCCGC
  W
  ATTTATTTAT TTATTTATTT ATTTATTTAT TTATTTATTT ATAGGTTGAT AATTTCTTCT
  TTCCCCCTTT CTGCTATCTT TTTGTTAGCT TCTTGTCTCT G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52384904	NES15380747	PERLEGEN	MM_PANEL2	f	SNP	A	T	T	T	T	T	A	T	A	A	A	T
ss137658815	ENSMUSSNP642252	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47263497					SNP	A	T	T	T	T	T	A	T	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52384904	NES15380747	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:41376444 () rs orientation: forward

Symbol	Name	Function Class
Gm47376	predicted gene, 47376	within coordinates
Immp2l	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	within coordinates
Rr387110	regulatory region 387110	within coordinates