rs47264795 SNP Detail

Summary

• ID
  rs47264795
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128783930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTTTACA ACAGTTTAGG
  GAATCCATTT GTTCCATCAA GCAATCTTTC ATTTCATTTT CTGTCCACAA TCTGTGAGCA
  TTTTCCAAAT GCTCAAGGGA AAAATAGATT AGGTTGTGGG CTCCTCATAG CTGTCTCATG
  TTTGAATTCC TAAGACAACC ACAGTCTTCA GACAGTTTTG CTTTCTGAGG CTATAAAATG
  Y
  CTTAGATAAT GTGCAAACTC AGCTGTCAGG CTTTGTGCTC TAGAGAAATT AATAGATGTG
  TTGTCATGAA AGATGCCCAG GTCTGGGTCT TTTGTGATGT CTTAGTGAGG GTTACCGTTG
  CTGTGATGAA GCACCATGAG CAAAAGCAAC TTGGGAAGGG AAGGGTTTAT TTGGCTTATG
  CTTTGACATC ACTGTTTACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60795384	NES16468495	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	C	T	T	T	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47264795					SNP	T	T	T	T	C	T	C	T	T	T	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60795384	NES16468495	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128783930 () rs orientation: forward

Symbol	Name	Function Class
Rr372000	regulatory region 372000	656 bp downstream
Rr417836	regulatory region 417836	856 bp proximal