rs47266437 SNP Detail

Summary

• ID
  rs47266437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137667939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTACGGAA TAGAGTGTCA
  CATTTCCAAG GCTGTCATTT TCCACTTCAT CTTCAAGATG AAAAACGTTG TATAAAATCT
  CTCCTGCTCA CTTCATTTGT TCATTTCTCT TCTCCCTAGT CTCACCTCCC ACTCTGTGGC
  CAACACCCCA ACTTCAGAAT GTATCAGAGT CAACAGTAAG GTCTGAAGAG CCAGGTTGCT
  R
  GGTCTCATGC CCAGACGATG ACTCAGCAGG TGGAAGGTTT TTAACAGACT CTCACCTCAG
  TGGATGTTGC TGATCTGGGG CGCCAGCTTC AGGGCCCCTG TCCATCTGGA CCTGCTGTTC
  CTCTAGGAAG AGTTTTTTCC ATCCTTGCTC CTTACCTACA ATTGGCCCTT CCCATTGGTA
  AACAACCTTG AGTCTTCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss135945641	ENSMUSSNP4579375	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320977302	CHEV_3_137625142	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47266437					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137667939 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dapp1	dual adaptor for phosphotyrosine and 3-phosphoinositides 1			Intron
				Noncoding-Transcript-Variant
Rr586037	regulatory region 586037			within coordinates
Rr586038	regulatory region 586038			1303 bp proximal