rs47274987 SNP Detail

Summary

• ID
  rs47274987
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:41275010 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G AAAAAGACAG ACCGACTTGA CTCTAGCTGC ATATGTATCA
  AAAGTTGGTC TAGTCGGCCA TCACTGGAAA GAGAGGCCCA TTGGACATGC AAACTTTTTA
  C
  GCCCCAGTAC AGGGGAAGGC CAGGGCCAAA AAGTGGAAGT CGATGGGTAC GGGATTGGTG
  GGGAGGGTAT GCGGGACTTT TGGGATAGCA TTTGAAATGT A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss144782978	ENSMUSSNP3081359	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47274987					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:41275010 () rs orientation: reverse

Symbol	Name	Function Class
D2Dcr134	DNA Segment, Chr 2, Derry C. Roopenian 134	877 bp distal
Lrp1b	low density lipoprotein-related protein 1B	within coordinates
Rr556252	regulatory region 556252	1979 bp distal