rs47278873 SNP Detail

Summary

• ID
  rs47278873
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61334742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCTGTGTC TATTAGTTAC ATCAAGATTT TTCAGAGACT
  CCATGGTGGT ATGTAGCAGG CATTTGCTTC CACAGCACTT CTCACAGTGT CTAACCTAAG
  K
  TTGTGAAAAT GTGAAAATTT TTCTTAGTCT CTGTCACAAG CTGAGATTGA ATCTTGTATC
  TTCTTTGCAG AAGACATATT CCAGCATGAC TGAGAAAAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144742952	ENSMUSSNP2199149	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47278873					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61334742 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	1173 bp downstream
Mir344d-1	microRNA 344d-1	1802 bp upstream
Mir344d-2	microRNA 344d-2	278 bp downstream