rs47279240 SNP Detail

Summary

• ID
  rs47279240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:158976584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACTTCCTT TCACTACATC ACATTCAATA ATGCCTTCAC
  CCTGACCAAA GCTTGATTGC TTCCATGCCA CCCAAAAGAC TGTGATTAAA AGCTTTCGGG
  R
  GGACTGTGTA CACGTAGAAG CTACTGGTTT TATTGCATGC TTTTTGCTAA TTCCTGTTCT
  TTCCGATAAA ACAGGTGATG CTCTGAGGCA TTAATCTAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145858859	ENSMUSSNP5981829	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47279240					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:158976584 () rs orientation: forward

Symbol	Name	Function Class
4930562F17Rik	RIKEN cDNA 4930562F17 gene	within coordinates
Rr421502	regulatory region 421502	136 bp distal