rs47283136 SNP Detail

Summary

• ID
  rs47283136
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:76800397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAA TTTGGCAGCA CTTTAAGGTG
  S
  GGCGTTAAAA TGTGAGTTTC CATAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320356656	CHEV_2_76808110	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47283136					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76800397 () rs orientation: forward

Symbol	Name	Function Class
Rr559723	regulatory region 559723	921 bp distal
Rr559724	regulatory region 559724	127 bp proximal
Rr559725	regulatory region 559725	849 bp proximal
Tssr18508	transcription start site region 18508	1582 bp downstream
Tssr24820	transcription start site region 24820	1583 bp upstream
Tssr24821	transcription start site region 24821	1551 bp upstream
Tssr24822	transcription start site region 24822	1521 bp upstream
Tssr24823	transcription start site region 24823	866 bp upstream
Tssr24824	transcription start site region 24824	827 bp upstream
Tssr24825	transcription start site region 24825	372 bp upstream
Tssr24826	transcription start site region 24826	332 bp upstream
Tssr24827	transcription start site region 24827	311 bp upstream
Tssr24828	transcription start site region 24828	228 bp upstream
Tssr24829	transcription start site region 24829	116 bp upstream
Ttn	titin	within coordinates