rs47288775 SNP Detail

Summary

• ID
  rs47288775
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:27132903 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G AACACTGGCG GAAGGCTTTA GCCATGTCAG AGCACTTATA
  GGAAAATACT GAAAGAGAGC ACGTGGATCC ATACTCTAGA CTAGCGTGGT ACTGGAACTC
  R
  GGAATGAAAA ATTAATGTAT GGGTAGAGAA CACTAGCCTC CAGGAGGAGA GCTTCCTTAA
  AACTCTTTTG CCTCATGAGT GACTTTTAAG CCTTTCGGCT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss137931946	ENSMUSSNP1244911	ENSEMBL	ENSEMBL_Sanger	r	SNP	C			C
ss137937194	ENSMUSSNP2507039	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	C	T
ss148521816	ENSMUSSNP1974069	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47288775					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:27132903 () rs orientation: reverse

Symbol	Name	Function Class
Rr376259	regulatory region 376259	within coordinates