rs47301953 SNP Detail

Summary

• ID
  rs47301953
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48917463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCA AAGTGAACAT ATTCTGTTTG
  C
  GTGCGGAGCG TGGGAGGCGT GGCTT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss145720328	ENSMUSSNP5531690	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss325409602	CHEV_17_48749760	CHEVERUD	SCREENING_POP	f	SNP			C		C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs47301953					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48917463 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9295	CpG island 9295	627 bp proximal
Gm64620	predicted gene, 64620	1054 bp upstream