rs47304225 SNP Detail

Summary

• ID
  rs47304225
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30258110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAATAAGCAA AAGAAAGAAA AAATACAAAG ACAGACAGAC
  AACACAACGT GGCTTTGATC TTCTCCAGCA CAGAACCCTC AAGGAGTCTT CAATCCTGAC
  Y
  CCAGAAAATG GGGTCTGTAC TCAGTCTGGC GTTTCCAAAC CCACCCTTGT CCTACCTGCA
  TAGTTGTAGT GAGGCTCCCT CCACTATATA TATTTCTCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss148682485	ENSMUSSNP1560966	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss322135263	CHEV_7_31343704	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47304225					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30258110 () rs orientation: forward

Symbol	Name	Function Class
Lin37	lin-37 DREAM MuvB core complex component	within coordinates
Rr400243	regulatory region 400243	910 bp upstream
Tssr71791	transcription start site region 71791	57 bp downstream
Tssr71792	transcription start site region 71792	88 bp downstream
Tssr71793	transcription start site region 71793	813 bp downstream
Tssr71794	transcription start site region 71794	915 bp downstream
Tssr71795	transcription start site region 71795	1143 bp downstream