rs47306880 SNP Detail

Summary

• ID
  rs47306880
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:36648112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTG GGGCCTTTCC AAGACGTCCT
  Y
  CCACCTTCCT TCACCAGACC CCCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148859499	ENSMUSSNP5249920	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss322169153	CHEV_7_37733706	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47306880					SNP	C	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:36648112 () rs orientation: forward

Symbol	Name	Function Class
Gm72473	predicted gene, 72473	within coordinates
Rr170674	regulatory region 170674	290 bp proximal