rs47309734 SNP Detail

Summary

• ID
  rs47309734
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156057526 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGT GGTAGGAAGA AATGAACATA
  C
  TTAGTGGGTC TTTTGTTTTT TCAGT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145791112	ENSMUSSNP4032331	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47309734					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156057526 () rs orientation: forward

Symbol	Name	Function Class
Rr421146	regulatory region 421146	602 bp distal
Rr421147	regulatory region 421147	66 bp distal
Rr421148	regulatory region 421148	316 bp distal
Rr421149	regulatory region 421149	196 bp distal
Rr421150	regulatory region 421150	681 bp proximal