rs47311372 SNP Detail

Summary

• ID
  rs47311372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:70869456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTACATC TCATTGTTCT
  CCGAATCATT TCGTTTCTAA GTATGTGTTA TTCTAGAAGA GGTAATAATT TTCAGCTGCT
  AAAAATTACT GCACAGCCTT GGTTTAGGTG GATTTTATTT TGTGAGAGCA GGCTTTTAAA
  AATAGCGGCA TCGTGGTAAT GTGAATTTCC CCTGCAACTT TCTTGATTGC CCATGGCTGC
  R
  ATGGTTTCAG TGCATATGGA CAATGTGGCT GTTCCCAAGC TCTCGGGAGT AGAAGCCATT
  ACAACTGAGA CCTTTCTCAC CGCCTTGGCT AGAATATCTC ATAAACAAGA AGTGGAGAAA
  CGGTCACCAG GTTGGCCTCA CTCGGCAATT CTGCTTTTCG GTGTTTAATA CAGGGGATCT
  GGTTCTGTTT GCATCTTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss145884234	ENSMUSSNP4484730	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs47311372					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:70869456 () rs orientation: forward

Symbol	Name	Function Class
Dlgap1	DLG associated protein 1	within coordinates
Rr342743	regulatory region 342743	257 bp distal
Tssr145664	transcription start site region 145664	711 bp downstream