rs47312417 SNP Detail

Summary

• ID
  rs47312417
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32884330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGATGAAG AATGGGTCCA
  TGAACACTGA TGTGGTTGGT GAATGCAGCT TCTTCCTTGT GTGAAACAAG TCAGTTGACT
  CACCTAAAGG GCTAGGCCTG AGAGACTGGG TTCAAGAGGG ACATGATATT ACTCTAGTGA
  AAAAACATAA GCCTCTACTT CCACCTGATA AAGGGACCAG AAAATGCATG CCCCTGGGTA
  K
  GGACTTCACA GCTTAAGGGC ACAATGCTAC AGGTCTCAAC CAGTTCTGAG TTACTCCAAC
  CATGCATACA CATTTGGGAG CTGAACACGC TCTTTAGAAT AGACACTCAA GGCTAGAAGG
  CATCACCGCA GCCTATGGCA GGGTAGCTAC TCGGTTCCAC GCTGGGGAGT TGTCACTGGC
  AGATGCTAGG GTCATGCAGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148850598	ENSMUSSNP2509981	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs47312417					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32884330 () rs orientation: forward

Symbol	Name	Function Class
Mylk4	myosin light chain kinase family, member 4	480 bp downstream
Tssr121998	transcription start site region 121998	1360 bp downstream