rs47313156 SNP Detail

Summary

• ID
  rs47313156
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77920275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGTTATGG AAGCTGTAGT
  GTGTTCCACA GTACGCCCTT TTGTGGTATA TACTTCTTTG CTTGCAAAAG TTCATTGCAA
  TGAGTCGTTG GTCTGGTACG AGGCCTCTGG CTTCTGCTAC TCTATCAGTA CTATAACCAA
  ACTGGGACTC TTCATGGATG TCCTGATGTT GCCTTGTGTC ATGGAGATCC CGTGGTTTTG
  R
  ATCTATAAGA GTGGCTCCTT CATGCACTCC AGCAGTTCAT CCACGGGGTA GATGTTGGGG
  TGTACCAGTT TAAAGCCCTG ATCTCTGCCT GAGAGGTATC TGAGCTGGTC ACCCCACCCG
  ATCCCCTGCT ATCACACCCT CAGGGATGGC TCACTAGCAA TGCCCCCAGA CCAGATCCAG
  CTCTATCCTG CTGCCCAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136663608	ENSMUSSNP1679704	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47313156					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77920275 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	979 bp downstream
Gm69108	predicted gene, 69108	within coordinates
Rr683456	regulatory region 683456	1868 bp distal
Rr683457	regulatory region 683457	1043 bp proximal