rs47315858 SNP Detail

Summary

• ID
  rs47315858
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118688705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAGCATTG CAGCTTAGTC
  TCACACCAAG GTCCTCACTC TCTGGGCTCC ACAAGGGCCA TCCTTCGGCT GCTTGCTCAA
  CGTCATGTCA CCACCCACTC TTCCTCAGAA AAAGCTATTT CCTTGAGAAG CCACCCAGGA
  CCTATACAAC ACAGGACGCC CGCTCTGCCG TCGTACGCAT GCTCACTGCC ACGTGCGTCT
  S
  CTTCACGCTT TCATTAGATT AGCCGTTCTC TGTTCATTCA ATCACGTTTG CCTTCACAAT
  CAGCCTAAAA ACTCCCCAAA GACAGGATCC GTGTCTATTT TGTTGGATAT TTTCTATTTC
  TAGTGCCTGG GATCCAACTT CACATGTAGG CATTTAGTAA GGACTTGGCA GACGAATGTG
  GTCTGCAACA GATGTTAAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
ss61322050	NES16929563	PERLEGEN	MM_PANEL2	f	SNP	G		C	C
ss323503892	CHEV_10_118289856	CHEVERUD	SCREENING_POP	f	SNP		G			C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
rs47315858					SNP	G	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322050	NES16929563	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118688705 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	81 bp downstream
Rr226050	regulatory region 226050	within coordinates
Rr226051	regulatory region 226051	897 bp proximal