rs47316300 SNP Detail

Summary

• ID
  rs47316300
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40831555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTGGTCA GGACAGTAGT
  AAAGAGAAAC ACAGGACTCT GATGGCTAGA AAACTCAAAT CGAATGCATT TCCTCATCTG
  CCCATGATTG ACTGAGGCCA CATTTTGCTT AAACTTAGAT ACTCAGTAAG TGGCATAGGG
  ATGTGAAGCA TTGCTTACAG TTCCTATTTC ACTGGTCCAC CATGAACAAG AGCAAAGGCT
  R
  TCACTCTGGG ATGTATGGGC ACTGAGTGTA TGAGGATCCA GAAGGACCTG GAATGTTTTC
  CAGATTCTGG GCAGTGACTG GTGTCGATGA GGGAAGACCA AAGAAAAAGA GACAGTAGAG
  ATCTCTGTGG GCATGTTTTG ACTCTAATTC TGAACATAAA TTACAATGAA AAAGCAAGCA
  GTGAATTGGA AAGTAGGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62724047	NES17340790	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47316300					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62724047	NES17340790	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40831555 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	within coordinates
Gm49847	predicted gene, 49847	within coordinates
Rr337560	regulatory region 337560	1815 bp distal
Rr392616	regulatory region 392616	1260 bp downstream
Tssr144637	transcription start site region 144637	636 bp downstream
Tssr144638	transcription start site region 144638	620 bp downstream