rs47322062 SNP Detail

Summary

• ID
  rs47322062
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:76021917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCCAGAA AAAGTGATAG
  CAGAAAAAAA GTTACTTCTG GTGGCAGTAA AAACAGGCAC TAAACAGTCA CTCTGTACAA
  CATAACCAAA CACTTAGCTA AATTAAACCA ACTGTGAGCA AAAGAAATCC ACCAACAGCA
  AGAATCAGCT TTTCCTGTGT GTTGCTGTAT GTCTTCTTAA AACTCTAGTG TATGCAAATC
  T
  AAGTGGGGGA TGAGCTACTT AGCCGGGTTG GAAGGCTTGC CATGGCAGGA GATCCTTTTC
  CATCCTAGCT TCCTGATTTC TTAACAACTT TACACACAAA AAATTCTCAC CAGAAATTTG
  GGAGACAGAG GCAGGAAGGT AAGGAATTCA AAACCAGCCC TGGCTATACA GACAAGTGTG
  AGGCAGCCCA AGAAACACAC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144640673	ENSMUSSNP1215656	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47322062					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:76021917 () rs orientation: forward

Symbol	Name	Function Class
Rhobtb3	Rho-related BTB domain containing 3	within coordinates
Rr273737	regulatory region 273737	1684 bp proximal
Rr277199	regulatory region 277199	1283 bp proximal
Rr277200	regulatory region 277200	1684 bp proximal