rs47322714 SNP Detail

Summary

• ID
  rs47322714
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:52846354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGCCACCA GCAAACTGGG
  GGTCCACAGT CTGCATAAGT CAGATACTGT TCCAGGAGGG GGTGAAGTGG AGTGGGACGG
  GAAGAAAAGA GAGTATGAAG CAGCTCTCTG AGACAATCCT GGCTTGTTCA TATTTCTCTA
  TTGGGGATAT GGTGGTGGGT TTGAATTAAA CAAAAGGTTA TATAGTTTCT GGGGAAGGGC
  R
  TGAGAATATC CAGGGAGGGA AAGGGCACTC ATTGCCTGAA GGATTCTGCT ACTGAGATGC
  CTCGTTAGTT CGGCGAGGTA TCCTAGGTGC TGAGTGGTCA CTGATTAAGT GGGACAAGCT
  GGTTGGGAGT CGCCTAGTTG AATGCTCTGA GGCAGGTATG GAACCAGGGA GGGGTTAGCC
  CTCCCCCTGC AGGTCCCACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss137742256	ENSMUSSNP188041	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss324040935	CHEV_12_53900558	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47322714					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52846354 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	Intron
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	within coordinates
Rr466054	regulatory region 466054	153 bp proximal