rs47324131 SNP Detail

Summary

• ID
  rs47324131
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127923960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCC TCGTGGTCAT ATTTACTTAG
  C
  ATTGCAGTGC AGGAACATCT TTTAA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147737930	ENSMUSSNP2040692	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323531648	CHEV_10_127525147	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47324131					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127923960 () rs orientation: forward

Symbol	Name	Function Class
Atp5f1b	ATP synthase F1 subunit beta	within coordinates
Rr441098	regulatory region 441098	1402 bp distal
Rr441099	regulatory region 441099	1501 bp distal
Tssr96323	transcription start site region 96323	1994 bp downstream
Tssr96324	transcription start site region 96324	1924 bp downstream
Tssr96325	transcription start site region 96325	1785 bp downstream
Tssr96326	transcription start site region 96326	1769 bp downstream
Tssr96327	transcription start site region 96327	1742 bp downstream
Tssr96328	transcription start site region 96328	1702 bp downstream
Tssr96329	transcription start site region 96329	222 bp upstream
Tssr96330	transcription start site region 96330	282 bp upstream