rs47324177 SNP Detail

Summary

• ID
  rs47324177
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54688945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGATCAGC CAAGGCTACA
  CAGAGAAAAA AGAAACCTAA AATAAGATAA CATAGGGTCT CACTATGTAT CCTTAGCTGG
  CCTAGAACTC CCTATGTAGA CCAAGCTCCC TACATAGACC AAACTCACAG AGGTTCACCT
  GCCTCTGCCT CCCAAATGCT GGATTTGAAG ATATGATCTA TGGCTGGGGA TTTAGCTCAG
  R
  GATAGAGCAT TTGCCTAGCA AGCATGGGGC TCTGGGTTTA GTCCTCAGCT AAGGAACAGG
  GAAGGCAGAT GCTCCCCAGC CCAAGGCTTC GTTTTTTTTG TCACGGTTCT CCATGAGAAC
  CTCAAATGGA GGTATTTAGT GACCGTGCCT CCTGCAAAGC CTTTCTGAAC CTTTCTGTCA
  CACCCCATGG GCTTTTCCCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324637281	CHEV_14_55070325	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47324177					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54688945 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6457	CpG island 6457	1944 bp distal
Gm24424	predicted gene, 24424	1424 bp upstream
Rr289214	regulatory region 289214	1745 bp distal
Rr297196	regulatory region 297196	1944 bp distal
Rr389675	regulatory region 389675	658 bp upstream