rs47328090 SNP Detail

Summary

• ID
  rs47328090
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:43343932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTGCAAACTG TCACAAAGAA AGTAACAGAA CAACATTTTA
  TTAGAAAGAC ATGAAGGAAT ATTCCAGAAC AATAGAGGAC TCAGTGCAAT TAGCCATCTT
  W
  TTTTTTTTTT TACATGTATT TGATGTGTTT GTGTGTGAGT TTGTATGTAT GAGGGAGTAT
  TCACATATAT GTATGTCATG ATGGGCTTGT GGCCATAAGA G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135056870	ENSMUSSNP1215667	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47328090					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:43343932 () rs orientation: forward

Symbol	Name	Function Class
Gm18865	predicted gene, 18865	1376 bp downstream