rs47329700 SNP Detail

Summary

• ID
  rs47329700
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137042400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGGGGAAT TAATCTTTCC TATCATGAGT CTAAAAGTCT
  CTGAAGTTGT AGTTCTGTTC CCAGTGGCTA CGAGAAATTA GCCAATTCTT ATCTCCAGTA
  W
  CAAGCACCAG GCCCCATCTC CACTGAGAAC ACCTGACATT CTGAACACAG TAAAGCAGAG
  CACAGAGCAA ACTTCTAAAA ATAATGGTTC ATGCTTTGT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss135939607	ENSMUSSNP2468087	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320975345	CHEV_3_136999603	CHEVERUD	SCREENING_POP	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47329700					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137042400 () rs orientation: forward

Symbol	Name	Function Class
Tssr35852	transcription start site region 35852	509 bp upstream