rs47330896 SNP Detail

Summary

• ID
  rs47330896
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:99098841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGAACTG TAGAATTCCA
  GCTCAGCAGC TGGCAGAGCT CTGGGTCTCC AAGTCATCTC TGGCATCTGA GCAGTCCTTT
  CTAGATGATA GTCTAAAATC TAGGAAGTTC AGAAGGGGGC AAGAGGAGTT GGCAGTCCTT
  GAAAACCAAC CACAGGGATT AACTAATCCA AATAGGCAAA CTGGGAGAGG AGTGTACTTA
  R
  CCTACCTGGA TCTATGTACC ACATGGAAAA ATTAGAGAAT CCCTGTTTGC AAAAGGGCTA
  AGATTTCATC AGTTCTATGA GACTGAAGAG TTCTGAGGAA TTTGACTTTG CTTAGAACAG
  TTCTTATATG ATCCACAAAA ATGATATAAG GCATAACATA TTTTTATTAA TATTAATTTA
  TCTTGTCTAT AATTTTCATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss60654327	NES16257429	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs47330896					SNP	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60654327	NES16257429	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:99098841 () rs orientation: forward

Symbol	Name	Function Class
Rr382525	regulatory region 382525	502 bp upstream
Rr668405	regulatory region 668405	875 bp proximal