rs47334761 SNP Detail

Summary

• ID
  rs47334761
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19596755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCATTTGC ATAACAGCCA
  TCTAGGTGAC TAGAAGTACA AGGATGCTCA GAATGTCAGA AGGTTTGTTG TTGGTGTTTT
  GTTTTGTTTT GTTTTTCAAG ACAGGGTTTC TCTGTGTAGT CCTGGCTGTC CTGGAACTCA
  CTCTGTAGAC CAGGCTGGCC TTAAACTCAG AAATCTGCCT GCCTCAGCCT CCCAAGTGCT
  G
  GGATTAAGGG CATGTGCCAC CACTAACCCG GCCCAGAATA TTTTTTTTAA ACACACACAC
  ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACACACTTGA TCGGCATGTG
  ATGCCATAAA TACAAAGACA TTGGCAAGAT TCTGGAAGGT AAGGCTCACT GATCCTTGTG
  AACAAACATT TCTGGATTAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148485986	ENSMUSSNP2047875	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs47334761					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19596755 () rs orientation: forward

Symbol	Name	Function Class
Ceacam16	CEA cell adhesion molecule 16	1531 bp upstream
Gm44659	predicted gene 44659	within coordinates
Rr643320	regulatory region 643320	1366 bp proximal
Tssr71042	transcription start site region 71042	1605 bp upstream
Tssr71043	transcription start site region 71043	1588 bp upstream
Tssr71044	transcription start site region 71044	1531 bp upstream