rs47348287 SNP Detail

Summary

• ID
  rs47348287
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129202858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGGACCAGAC ACTTCATTAC CCAAACTTTC CCAAAGCCAT
  AAATGGTTCT GAGGTGAGAG TCATCTAGTC AGTCCAAGCA AAAGCAGGTT TGCTTGTTTT
  K
  TTTTTTTTTT TTTCCCCTTT CGCCAGTTAT CACCAAGTGG TAATAAAGGC ACTGACTCTT
  AAGTCTATAC TTTAAAAGTA GGGGTTCCAA TGAAAAACAC T                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147438172	ENSMUSSNP644622	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47348287					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129202858 () rs orientation: forward

Symbol	Name	Function Class
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Sync	syncoilin	506 bp downstream
Tssr39138	transcription start site region 39138	647 bp downstream
Tssr43491	transcription start site region 43491	807 bp downstream