rs47352433 SNP Detail

Summary

• ID
  rs47352433
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127931495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCTTCAGC AATAGGGTCT TACTGTAGCT TCTGGAGTGT
  GACCTATAAT ATTTGAGGTC TATGGGACCT CATGGAACAA CAACTCCAAA AATAAGTAAC
  Y
  CATTCTTGGC ACAAGACTTT TATTTATTAG ACTATGTATC TAGTAGAGAC ATTGTCACCC
  TGTTTTGGAT TAACTCTATC TTAACTCATT TTATGAGTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147551129	ENSMUSSNP2273152	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47352433					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127931495 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Gm23101	predicted gene, 23101	349 bp upstream
Rr564642	regulatory region 564642	1127 bp distal
Rr564643	regulatory region 564643	1756 bp proximal