rs47357295 SNP Detail

Summary

• ID
  rs47357295
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82747141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGGTCCA GCAAATGTCA
  CCTCCTGCAG TGTGGCTAAA AGACAGCTTG CTTAGTGCTG AACATCAAAC GGTAAATTTA
  AGAGGCAAAT ACAAAGGTTA AGAATTCGAC AAGACTGAGA TAAGCTGTTT GGATAGATTA
  GACTTTGAAG ATTGAATTCA CTGACAGTAA AGATCAAACA TGCAACAACA GCCTTGCTAC
  R
  TTACTCAGTC CTTACCGATC TGCAAAGCCA AACTCCCATT TTTCCAATTT GAAGACCAGA
  CTTCCATTTC ATCATGCTTA GCATGTCTAA CTGGCCTGAA AGATAATAAT GAATTGGATT
  CTCCCTACAA CTCTCCTCCC CATAGTAACC AACTTACGGT AACTGTGTTA GGTTCAGAAC
  TGCAAGGTCC TGTAATTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61434568	NES16814250	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47357295					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61434568	NES16814250	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82747141 () rs orientation: forward

Symbol	Name	Function Class
Gm38553	predicted gene, 38553	within coordinates
Phip	pleckstrin homology domain interacting protein	1071 bp downstream