rs47357474 SNP Detail

Summary

• ID
  rs47357474
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33151399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATTTCTCTGA AGTACCCAAC TTATTATAGT CATATTCTAA
  CAAGACGTGC TGAAGGGTTA GGATTTCAAT GTCTCTTTTT GGGAGTCACA ATTTAGCCCA
  Y
  AGGAGAAAGA CGCATTGGTT ACTTTTTTTT TTTTTTAAAT CACCCTTACA AGGAGGGAAA
  TTTTATTTGG CTCGTGGTTC ATTGAGGGGA AGGCATGATG G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582067	ENSMUSSNP4260003	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47357474					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33151399 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	1313 bp upstream
Rr464869	regulatory region 464869	823 bp proximal
Rr464870	regulatory region 464870	1324 bp proximal