rs47359067 SNP Detail

Summary

• ID
  rs47359067
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61862529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGCTACT TCATAACTGT
  AATTCTGCTA CTATTGTGAA TCTTAATGTA AATATCTGCT ATGCAGGATA CCAGATATGT
  GACCCCTTGG AGGGGTGGAG ACCTAGAAGT TGAGAACCAC TGATTTAGTA CCAGGTGTGG
  TGGGTATATG TAATCCCAGT ACAGTGGAGT CAGAGGACCA GCAGTTTAAG ATCATCTTCA
  R
  TGCCTCCAGG ATCCTCTGGG CCACTTCCCA GGTGTTTTGG GTTTCCTAAA GCCTGGGTGT
  CCATCCCTAC CTAGCATCCT CCTGGCATCC TCCTCCTCCT CTCTCCATCT CTGGACCAGT
  CTTGCCATTT GCCGTCCCCA GAGTCTCAGA TTCACCCCTT TCTCTAGAAG CTTCTGGCTC
  TGCTGGAGTT TCCCAAAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss61280186	NES16887330	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		G	G	G	G		A
ss323330471	CHEV_10_61489498	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs47359067					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61280186	NES16887330	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61862529 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	1135 bp downstream
Gm66887	predicted gene, 66887	204 bp downstream